From 9c8cf8bde19d53fb089656d5c762f965b8c9ae4f Mon Sep 17 00:00:00 2001
From: Tobias Klauser <tklauser@distanz.ch>
Date: Thu, 10 Jan 2013 15:18:48 +0100
Subject: scripts: random-muscle-activation: Implement basic functionality

The variation of the values can also be specified (-d/-D), in general
they should be -N/+N
---
 scripts/random-muscle-activation.py | 65 +++++++++++++++++++++++++++++++------
 1 file changed, 55 insertions(+), 10 deletions(-)

(limited to 'scripts/random-muscle-activation.py')

diff --git a/scripts/random-muscle-activation.py b/scripts/random-muscle-activation.py
index e0c3899..fb225cc 100755
--- a/scripts/random-muscle-activation.py
+++ b/scripts/random-muscle-activation.py
@@ -1,6 +1,8 @@
 #!/usr/bin/env python
 # -*- coding: utf-8 -*-
 #
+# random-muscle-activation.py -- Generate random muscle activation data in CSV
+#
 # Copyright (C) 2013 Tobias Klauser <tklauser@distanz.ch>
 #
 # This program is free software; you can redistribute it and/or modify
@@ -11,50 +13,73 @@ import os
 import sys
 import getopt
 import numpy as np
+import plotcsv
 
 DEFAULT_N = 1000
 DEFAULT_XMIN = 0.0
 DEFAULT_XMAX = 100.0
 DEFAULT_YMIN = 0.0
 DEFAULT_YMAX = 50.0
+DEFAULT_YDMIN = -0.5
+DEFAULT_YDMAX = 0.5
 
 def usage():
     print("""usage: {} [OPTION...] FILE...
 
+Generate random muscle activation data in CSV.
+
+options:
     -f    force overwrite of existing file
     -n N  set number of data points to N (default: {})
+    -p    plot data after generating it
     -x N  set minimum x value to N (default: {})
     -X N  set maximum x value to N (default: {})
     -y N  set minimum y value to N (default: {})
     -Y N  set maximum y value to N (default: {})
-""".format(os.path.basename(sys.argv[0]), DEFAULT_N, DEFAULT_XMIN, DEFAULT_XMAX,
-           DEFAULT_YMIN, DEFAULT_YMAX))
+    -d N  set minimum y change value to N (default: {})
+    -D N  set maximum y change value to N (default: {})""".format(
+        os.path.basename(sys.argv[0]), DEFAULT_N,
+        DEFAULT_XMIN, DEFAULT_XMAX,
+        DEFAULT_YMIN, DEFAULT_YMAX,
+        DEFAULT_YDMIN, DEFAULT_YDMAX))
 
-def generate_activation_data(N, xmin, xmax, ymin, ymax):
+def generate_activation_data(N, xmin, xmax, ymin, ymax, ydmin, ydmax):
     X = np.array([ ((x / float(N)) * (xmax - xmin)) + xmin for x in range(0, N) ])
     Y = np.zeros(N)
     # Y = np.array([ ((y / float(N)) * (ymax - ymin)) + ymin for y in range(0, N) ])
+
+    Y[0] = (ymax - ymin) * np.random.random_sample() + ymin
+    for y in range(1, N):
+        Y[y] = Y[y-1] + ((ydmax - ydmin) * np.random.random_sample() + ydmin)
+        if Y[y] < ymin:
+            Y[y] = ymin
+        if Y[y] > ymax:
+            Y[y] = ymax
+
     act = np.array((X, Y)).transpose()
 
     return act
 
 def main():
     try:
-        opts, args = getopt.getopt(sys.argv[1:], "fn:x:X:y:Y:h")
+        opts, args = getopt.getopt(sys.argv[1:], "fn:px:X:y:Y:d:D:h")
     except getopt.GetoptError as err:
         print(str(err))
         usage()
         sys.exit(-1)
 
-    overwrite = False
+    do_overwrite = False
+    do_plot = False
     N = DEFAULT_N
     xmin = DEFAULT_XMIN
     xmax = DEFAULT_XMAX
     ymin = DEFAULT_YMIN
     ymax = DEFAULT_YMAX
+    ydmin = DEFAULT_YDMIN
+    ydmax = DEFAULT_YDMAX
     for o, a in opts:
         if o == '-f':
-            overwrite = True
+            do_overwrite = True
         elif o == '-n':
             try:
                 N = int(a)
@@ -62,6 +87,8 @@ def main():
                 print("Error: number of data points must be an integer > 0")
                 usage()
                 sys.exit(-1)
+        elif o == '-p':
+            do_plot = True
         elif o == '-x':
             try:
                 xmin = float(a)
@@ -90,6 +117,20 @@ def main():
                 print("Error: ymax must be a float")
                 usage()
                 sys.exit(-1)
+        elif o == '-d':
+            try:
+                ydmin = float(a)
+            except ValueError:
+                print("Error: ydmin must be a float")
+                usage()
+                sys.exit(-1)
+        elif o == '-D':
+            try:
+                ydmax = float(a)
+            except ValueError:
+                print("Error: ydmax must be a float")
+                usage()
+                sys.exit(-1)
         elif o == '-h':
             usage()
             sys.exit(0)
@@ -105,16 +146,20 @@ def main():
         sys.exit(-1)
 
     for a in args:
-        if not overwrite and os.path.exists(a):
+        if not do_overwrite and os.path.exists(a):
             print("Error: output file {} already exists, use -f to overwrite".format(a))
             sys.exit(-1)
 
+    print("Generating {} files with {} data points each...".format(len(args), N))
     for a in args:
         with open(a, 'w') as f:
-            act = generate_activation_data(N, xmin, xmax, ymin, ymax)
+            act = generate_activation_data(N, xmin, xmax, ymin, ymax, ydmin, ydmax)
             f.write('x,y\n')
-            for x,y in act:
-                f.write('{},{}\n'.format(x,y))
+            for x, y in act:
+                f.write('{},{}\n'.format(x, y))
+            if do_plot:
+                print("Plotting data for {}, please close window to continue...".format(a))
+                plotcsv.plot(act[:,0], act[:,1], xmax, ymax, 'x', 'y', a, False, False)
 
     sys.exit(0)
 
-- 
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